牙鲆5个养殖群体的遗传多样性分析
刘海金[1,3] 朱晓琛[2] 孙效文[3] 杨立更[2] 薛玲玲[1,3] 毛连菊[4]
[1]中国水产科学研究院,北京100039 [2]中国水产科学研究院北戴河中心实验站,河北秦皇岛066100 [3]中国水产科学研究院黑龙江水产研究所,黑龙江哈尔滨150070 [4]大连水产学院生命科学与技术学院,辽宁大连116023
摘 要:
利用16对微卫星分子标记对牙鲆(Paralichthys olivaceus)的5个养殖群体进行遗传多样性分析。结果表明,等位基因数为2-9个,平均等位基因数为6.0625;有效等位基因数1.2596-5.5161,平均有效等位基因数3.692;各位点的杂合度观测值(Ho)0.2200-0.8000;杂合度期望值(He)0.2061-0.8187。各群体之间无偏倚杂合度期望值从小到大依次为丹东、北戴河、威海、青岛、荣成。Kruskal-Wallis检验结果(H=0.672,df=4,P=0.955)则说明,5个群体遗传多样性差异不显著。群体间基因分化系数(Gs,)为0.0991,各群体之间存在中度遗传分化。采用UPGMA法对5个群体进行聚类,可分3类:丹东和北戴河各为一类,威海、荣成、青岛为一类,其中威海与荣成群体的分化最小。结合Hardy-Weinberg平衡,拟合度检验和遗传偏离指数(动的分析结果表明,各群体的遗传平衡状况存在很大差别。遗传变异的分析结果说明5群体遗传多样性比较丰富。[著者文摘]
文章出处:
《中国水产科学》-2008年1期 -30-37页
栏目信息:
分 类 号:
文献标识码:
A
文章编号:
1005-8737-(2008)01-0030-08
Analysis of genetic structure among 5 cultured stocks of Japanese flounder Paralichthys olivaceus
LIU Hai-jin, ZHU Xiao-chen, SUN Xiao-wen, XUE Ling-ling, ZHAO Ying-ying , MAO Lian-ju (1. Chinese Academy of Fishery Sciences, Beijing 100039, China; 2. Beidaihe Central Experiment Station, Chinese Academy of Fishery Sciences, Qinhuangdao 066100, China; 3. Heilongjiang River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Harbin 150070, China; 4. College of Aqua-life Science and Technology, Shanghai Fisheries University, Shanghai 200090, China; 5. Life Science and Technology Institute, Dalian Fisheries University, Dalian 116023, China)
Abstract:
Genetic divergence within and between 5 cultured stocks (Dandong, Beidaihe, Weihai, Rongcheng and Qingdao) of Japanese flounder (Paralichthys olivaceus) was assessed by 16 microsatellite loci which in the 5 cultured populations showed allele number (A) was 2 to 9; average allele number was 6.062 5; effective allele number (Nc) was 1.259 6-5.516 1 : averge effective allele number was 3.692; observed heterozygosity value (Ho) is 0.2200 to 0.8000: excepted heterozygosity value (He) was 0.206 1 to 0.818 7. Hevalues followed the order of Dandong, Beidaihe, Weihai, Qingdao, Rongcheng, and a comparison by Kruskal-Wallis test revealed that there was no significant difference in genetic diversity of the 5 cultured stocks (H=0.672, df=4, P=0.955). The results also showed that the coefficient of gene differentiation between the stocks (GST) was 0.0991, there were moderate genetic differentiation among these 5 cultured populations. The genetic distance of 5 cultured populations was calculated and the cluster analysis by UPGMA method was carried out that all populations were pooled into three groups: Dandong, Beidaihe and Shandong (including Weihai, Rongcheng and Qingdao). Among the 3 populations of Shandong, Weihai and Rongcheng were more similar. Hardy-Weinberg equilibrium analysis in 16 microsatellite loci by Chi Square test and genetic deviation index (d) showed a remarkable difference in populations. [Journal of Fishery Sciences of China, 2008, 15 (1) : 30-37][著者文摘]
Key words:
Japanese flounder; cultured population; genetic diversity; microsatellite
基金资助:
国家科技攻关项目(96-920-44-01);国家科技支撑计划(2006BAD01A1207);农业科技跨越计划(2006跨18)

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